Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| reductase | DI589_20125 | Not Available | + | 4282733 - 4286743 | 144073.0 |
| two-component system response regulator | DI589_20130 | Not Available | + | 4286777 - 4287367 | 21970.9 |
| nitrate transporter | DI589_20135 | Not Available | + | 4287370 - 4288584 | 43186.0 |
| nitrate abc transporter substrate-binding protein | DI589_20140 | Not Available | + | 4288918 - 4290249 | 48449.7 |
| nitrate abc transporter permease | DI589_20145 | Not Available | + | 4290297 - 4291373 | 38707.9 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | DI589_20150 | Not Available | + | 4291384 - 4293150 | 63804.2 |
| nitrite reductase large subunit | DI589_20155 | Not Available | + | 4293155 - 4295602 | 88447.5 |
| nitrite reductase (nad(p)h) small subunit | DI589_20160 | Not Available | + | 4295613 - 4295948 | 11966.2 |
| uroporphyrinogen-iii c-methyltransferase | DI589_20165 | Not Available | + | 4295994 - 4297397 | 49563.9 |
| hypothetical protein | DI589_20170 | Not Available | + | 4297703 - 4297915 | 7705.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.