Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| benzoate transporter | DI528_03765 | Not Available | - | 859488 - 860672 | 39753.8 |
| hypothetical protein | DI528_03770 | Not Available | + | 860929 - 861162 | 8565.69 |
| carboxynorspermidine decarboxylase | DI528_03775 | Not Available | + | 861291 - 862391 | 41289.4 |
| saccharopine dehydrogenase | DI528_03780 | Not Available | + | 862430 - 863671 | 45129.9 |
| hypothetical protein | DI528_03785 | Not Available | + | 864044 - 864889 | 31874.4 |
| hypothetical protein | DI528_03790 | Not Available | - | 864981 - 865316 | 12202.2 |
| atp-dependent clp protease proteolytic subunit | DI528_03795 | Not Available | - | 865512 - 866096 | 21374.6 |
| lrp/asnc family transcriptional regulator | DI528_03800 | Not Available | - | 866268 - 866699 | 15672.2 |
| saccharopine dehydrogenase | DI528_03805 | Not Available | + | 866823 - 867926 | 39325.4 |
| hypothetical protein | DI528_03810 | Not Available | - | 868080 - 868439 | 13100.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.