Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna methyltransferase | DI528_03660 | Not Available | + | 837961 - 838416 | 16519.9 |
| hypothetical protein | DI528_03670 | Not Available | - | 840156 - 840413 | 10047.9 |
| oxygen-dependent coproporphyrinogen oxidase | DI528_03675 | Not Available | + | 840581 - 841495 | 34470.8 |
| hypothetical protein | DI528_03680 | Not Available | + | 841674 - 841946 | 9877.47 |
| duf1059 domain-containing protein | DI528_03685 | Not Available | + | 842090 - 842275 | 6871.15 |
| cca trna nucleotidyltransferase | DI528_03690 | Not Available | - | 842394 - 843650 | 45538.0 |
| coa pyrophosphatase | DI528_03695 | Not Available | - | 843647 - 844297 | 24014.6 |
| duf1285 domain-containing protein | DI528_03700 | Not Available | - | 844294 - 844917 | 22574.2 |
| aaa family atpase | DI528_03705 | Not Available | + | 845082 - 846095 | 36329.9 |
| duf58 domain-containing protein | DI528_03710 | Not Available | + | 846112 - 847032 | 34092.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.