Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_03360 | Not Available | + | 778475 - 778753 | 10323.3 |
| spermidine/putrescine abc transporter atp-binding protein | DI528_03365 | Not Available | + | 778770 - 779870 | 39853.9 |
| abc transporter permease | DI528_03370 | Not Available | + | 779873 - 780796 | 34153.7 |
| spermidine/putrescine abc transporter permease potc | DI528_03375 | Not Available | + | 780789 - 781592 | 29939.1 |
| putrescine/spermidine abc transporter substrate-binding protein | DI528_03380 | Not Available | + | 781629 - 782666 | 38735.3 |
| 6-aminohexanoate hydrolase | DI528_03385 | Not Available | + | 782738 - 783919 | 43222.0 |
| hydrolase | DI528_03390 | Not Available | + | 783942 - 785615 | 60813.5 |
| hydrolase | DI528_03395 | Not Available | + | 785688 - 787361 | 60400.1 |
| tetr/acrr family transcriptional regulator | DI528_03400 | Not Available | + | 787369 - 788031 | 24458.2 |
| coa transferase | DI528_03405 | Not Available | + | 788244 - 789401 | 42238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.