Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DI528_02860 | Not Available | - | 666344 - 667129 | 29518.5 |
| hypothetical protein | DI528_02865 | Not Available | - | 667273 - 667965 | 24975.6 |
| hypothetical protein | DI528_02870 | Not Available | + | 668255 - 669103 | 30693.0 |
| porin family protein | DI528_02875 | Not Available | - | 669459 - 670097 | 22240.7 |
| gnat family n-acetyltransferase | DI528_02880 | Not Available | - | 670440 - 671033 | 21053.6 |
| ornithine decarboxylase | DI528_02885 | Not Available | - | 671110 - 672243 | 40751.8 |
| lysr family transcriptional regulator | DI528_02890 | Not Available | + | 672802 - 673695 | 33225.7 |
| duf1007 domain-containing protein | DI528_02895 | Not Available | + | 673788 - 674429 | 23708.0 |
| delayed-early response protein/equilibrative nucleoside transporter | DI528_02900 | Not Available | + | 674423 - 675475 | 36092.8 |
| hypothetical protein | DI528_02905 | Not Available | - | 675466 - 675699 | 8256.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.