Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | DI528_01905 | Not Available | - | 448784 - 450163 | 49191.9 |
| l-rhamnose mutarotase | DI528_01910 | Not Available | - | 450160 - 450483 | 12243.7 |
| branched-chain amino acid abc transporter permease | DI528_01915 | Not Available | - | 450483 - 451499 | 35512.7 |
| branched-chain amino acid abc transporter permease | DI528_01920 | Not Available | - | 451496 - 452494 | 34725.7 |
| d-xylose abc transporter atp-binding protein | DI528_01925 | Not Available | - | 452505 - 454037 | 55137.1 |
| rhamnose abc transporter substrate-binding protein | DI528_01930 | Not Available | - | 454215 - 455210 | 34321.2 |
| deor family transcriptional regulator | DI528_01935 | Not Available | - | 455266 - 456078 | 29665.9 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | DI528_01940 | Not Available | + | 456283 - 458379 | 76153.9 |
| l-rhamnose catabolism isomerase | DI528_01945 | Not Available | + | 458500 - 459792 | 47005.2 |
| iclr family transcriptional regulator | DI528_01950 | Not Available | - | 460151 - 460921 | 27660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.