Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | DI528_07240 | Not Available | - | 1613188 - 1613529 | 12354.6 |
| mfs transporter | DI528_07245 | Not Available | - | 1613533 - 1614711 | 40430.1 |
| hypothetical protein | DI528_07250 | Not Available | - | 1614862 - 1615116 | 8874.75 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DI528_07255 | Not Available | - | 1615145 - 1617064 | 68036.8 |
| hypothetical protein | DI528_07260 | Not Available | - | 1617182 - 1618108 | 33380.6 |
| cystathionine gamma-synthase | DI528_07265 | Not Available | + | 1618378 - 1619601 | 44213.3 |
| sam-dependent methyltransferase | DI528_07275 | Not Available | - | 1620199 - 1621005 | 29682.4 |
| abc transporter substrate-binding protein | DI528_07280 | Not Available | + | 1621122 - 1622261 | 41700.0 |
| iron-siderophore abc transporter permease | DI528_07285 | Not Available | + | 1622334 - 1623401 | 37124.0 |
| ferrichrome abc transporter | DI528_07290 | Not Available | + | 1623395 - 1624150 | 27037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.