Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2007 domain-containing protein | DI528_06990 | Not Available | + | 1557673 - 1557903 | 8392.15 |
| methyltransferase | DI528_06995 | Not Available | + | 1558008 - 1558697 | 24347.2 |
| divalent metal cation transporter | DI528_07000 | Not Available | - | 1558717 - 1560063 | 47652.3 |
| s49 family peptidase | DI528_07005 | Not Available | + | 1560353 - 1561219 | 31321.2 |
| hypothetical protein | DI528_07010 | Not Available | + | 1561235 - 1561426 | 7554.1 |
| pbsx family transcriptional regulator | DI528_07015 | Not Available | + | 1561533 - 1561775 | 8763.46 |
| endoribonuclease mazf | DI528_07020 | Not Available | + | 1561775 - 1562110 | 11981.5 |
| glycine--trna ligase subunit alpha | DI528_07025 | Not Available | + | 1562207 - 1563160 | 35374.8 |
| hypothetical protein | DI528_07030 | Not Available | + | 1563497 - 1564048 | 20185.2 |
| duf2207 domain-containing protein | DI528_07035 | Not Available | + | 1564066 - 1566003 | 68605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.