Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | DI528_06890 | Not Available | + | 1536822 - 1537592 | 26658.6 |
| hypothetical protein | DI528_06895 | Not Available | + | 1537906 - 1539960 | 76256.0 |
| lysr family transcriptional regulator | DI528_06900 | Not Available | + | 1540305 - 1541195 | 32214.9 |
| conjugal transfer protein trag | DI528_06905 | Not Available | + | 1541381 - 1543369 | 72927.3 |
| copg family transcriptional regulator | DI528_06910 | Not Available | + | 1543353 - 1543859 | 18729.5 |
| gnat family n-acetyltransferase | DI528_06915 | Not Available | + | 1543987 - 1544439 | 16988.4 |
| adenylate kinase | DI528_06920 | Not Available | - | 1544457 - 1545026 | 21062.9 |
| p-type conjugative transfer atpase trbb | DI528_06925 | Not Available | + | 1545236 - 1546231 | 34974.3 |
| conjugal transfer protein trbc | DI528_06930 | Not Available | + | 1546228 - 1546560 | 11412.2 |
| conjugal transfer protein | DI528_06935 | Not Available | + | 1546560 - 1546841 | 9824.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.