Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_06790 | Not Available | - | 1514359 - 1516824 | 89561.7 |
| hypothetical protein | DI528_06795 | Not Available | - | 1516821 - 1518407 | 58754.0 |
| duf429 domain-containing protein | DI528_06800 | Not Available | - | 1518400 - 1519302 | 33507.8 |
| ku protein | DI528_06805 | Not Available | + | 1519763 - 1520569 | 30389.1 |
| hypothetical protein | DI528_06810 | Not Available | + | 1520611 - 1520856 | 8971.85 |
| dna ligase d | DI528_06815 | Not Available | - | 1520875 - 1523430 | 94122.7 |
| ku protein | DI528_06820 | Not Available | - | 1523433 - 1524296 | 31992.3 |
| damage-inducible protein | DI528_06825 | Not Available | + | 1524564 - 1525325 | 26539.0 |
| nucleotidyltransferase | DI528_06830 | Not Available | + | 1525240 - 1526766 | 55579.3 |
| error-prone dna polymerase | DI528_06835 | Not Available | + | 1526763 - 1530050 | 122215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.