Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylcholine/phosphatidylserine synthase | DI528_06640 | Not Available | + | 1475088 - 1475828 | 27612.2 |
| abc transporter | DI528_06645 | Not Available | + | 1475969 - 1477516 | 54756.9 |
| sugar abc transporter permease | DI528_06650 | Not Available | + | 1477506 - 1478597 | 39201.8 |
| abc transporter permease | DI528_06655 | Not Available | + | 1478594 - 1479514 | 32029.2 |
| bmp family abc transporter substrate-binding protein | DI528_06660 | Not Available | + | 1479552 - 1480625 | 38771.0 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DI528_06665 | Not Available | + | 1480759 - 1482120 | 47467.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DI528_06670 | Not Available | + | 1482230 - 1484056 | 66132.8 |
| hypothetical protein | DI528_06675 | Not Available | + | 1484282 - 1484968 | 25280.2 |
| atp-dependent dna helicase recg | DI528_06680 | Not Available | - | 1484996 - 1487101 | 76476.7 |
| succinate dehydrogenase assembly factor 2 family protein | DI528_06685 | Not Available | + | 1487200 - 1487517 | 12059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.