Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine methyltransferase | DI528_06540 | Not Available | + | 1456337 - 1457902 | 56536.2 |
| ferredoxin | DI528_06545 | Not Available | + | 1458004 - 1458708 | 25184.1 |
| chromosome partitioning protein para | DI528_06550 | Not Available | - | 1458719 - 1459426 | 24809.1 |
| hypothetical protein | DI528_06555 | Not Available | + | 1459646 - 1460392 | 27425.0 |
| hypothetical protein | DI528_06560 | Not Available | + | 1460538 - 1461158 | 22795.1 |
| hypothetical protein | DI528_06565 | Not Available | + | 1461351 - 1461554 | 7458.75 |
| sulfonate abc transporter substrate-binding protein | DI528_06570 | Not Available | + | 1462015 - 1462980 | 33940.5 |
| sulfonate abc transporter substrate-binding protein | DI528_06575 | Not Available | + | 1463011 - 1463976 | 33884.5 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | DI528_06580 | Not Available | + | 1464002 - 1465171 | 41642.3 |
| aliphatic sulfonate abc transporter permease ssuc | DI528_06585 | Not Available | + | 1465241 - 1466077 | 30226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.