Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(20/20a) synthase dusa | DI528_06390 | Not Available | + | 1423260 - 1424294 | 37343.0 |
| cold-shock protein | DI528_06395 | Not Available | - | 1424377 - 1424589 | 7440.9 |
| molecular chaperone dnaj | DI528_06400 | Not Available | + | 1424974 - 1425579 | 22594.0 |
| hypothetical protein | DI528_06405 | Not Available | - | 1425634 - 1426245 | 22482.7 |
| hypothetical protein | DI528_06410 | Not Available | + | 1427084 - 1427314 | 8296.63 |
| antibiotic biosynthesis monooxygenase | DI528_06415 | Not Available | + | 1427414 - 1427725 | 11804.0 |
| hypothetical protein | DI528_06420 | Not Available | - | 1427843 - 1428427 | 21759.1 |
| excinuclease abc subunit uvrb | DI528_06425 | Not Available | - | 1429562 - 1432741 | 116179.0 |
| class i sam-dependent methyltransferase | DI528_06430 | Not Available | + | 1433007 - 1433612 | 23253.6 |
| ggdef-domain containing protein | DI528_06435 | Not Available | - | 1433662 - 1435677 | 72447.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.