Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3563 domain-containing protein | DI528_06340 | Not Available | - | 1412163 - 1412315 | 5959.36 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DI528_06345 | Not Available | - | 1412556 - 1414781 | 83527.4 |
| dna-directed rna polymerase subunit omega | DI528_06350 | Not Available | - | 1414878 - 1415279 | 14757.1 |
| nyn domain-containing protein | DI528_06355 | Not Available | + | 1415580 - 1416158 | 21874.1 |
| globin-coupled sensor protein | DI528_06360 | Not Available | + | 1416512 - 1418026 | 54907.3 |
| l-serine ammonia-lyase | DI528_06365 | Not Available | + | 1418812 - 1420212 | 49218.8 |
| gnat family n-acetyltransferase | DI528_06370 | Not Available | + | 1420329 - 1420787 | 17084.3 |
| short-chain dehydrogenase/reductase | DI528_06375 | Not Available | - | 1420870 - 1421613 | 26341.6 |
| arac family transcriptional regulator | DI528_06380 | Not Available | + | 1421712 - 1422635 | 33798.0 |
| duf1489 domain-containing protein | DI528_06385 | Not Available | + | 1422725 - 1423162 | 15888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.