Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | DI528_06240 | Not Available | + | 1391485 - 1392018 | 18937.0 |
| nad regulator | DI528_06245 | Not Available | + | 1392015 - 1393004 | 36901.4 |
| mechanosensitive ion channel protein | DI528_06250 | Not Available | + | 1393106 - 1393924 | 29574.0 |
| hypothetical protein | DI528_06255 | Not Available | - | 1393992 - 1394594 | 20322.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | DI528_06260 | Not Available | - | 1394822 - 1395727 | 31934.5 |
| l-aspartate oxidase | DI528_06265 | Not Available | - | 1395745 - 1397343 | 56715.1 |
| quinolinate synthase | DI528_06270 | Not Available | - | 1397390 - 1398469 | 39392.5 |
| duf2339 domain-containing protein | DI528_06275 | Not Available | + | 1398785 - 1401589 | 96959.0 |
| acyltransferase | DI528_06280 | Not Available | + | 1401765 - 1402787 | 37018.0 |
| phosphohydrolase | DI528_06285 | Not Available | + | 1402871 - 1403524 | 23674.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.