Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prolyl aminopeptidase | DI528_06140 | Not Available | + | 1370585 - 1371544 | 36089.6 |
| citramalate synthase | DI528_06145 | Not Available | + | 1371699 - 1373315 | 58341.3 |
| aldo/keto reductase | DI528_06150 | Not Available | - | 1373340 - 1374374 | 37027.9 |
| mfs transporter | DI528_06155 | Not Available | - | 1374433 - 1375608 | 39938.2 |
| lysr family transcriptional regulator | DI528_06160 | Not Available | + | 1375709 - 1376614 | 32812.5 |
| protein-l-isoaspartate carboxylmethyltransferase | DI528_06165 | Not Available | - | 1376639 - 1377550 | 33387.3 |
| eama family transporter rard | DI528_06170 | Not Available | + | 1377707 - 1378615 | 32872.4 |
| tigr00730 family rossman fold protein | DI528_06175 | Not Available | - | 1378631 - 1379251 | 22260.1 |
| peptidoglycan-binding protein | DI528_06180 | Not Available | + | 1379407 - 1381392 | 68008.7 |
| metal abc transporter permease | DI528_06185 | Not Available | + | 1381506 - 1383392 | 69868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.