Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | DI528_05930 | Not Available | - | 1330194 - 1331693 | 52734.6 |
| phosphatase | DI528_05935 | Not Available | + | 1331890 - 1332675 | 28554.2 |
| lps export abc transporter permease lptf | DI528_05940 | Not Available | + | 1332785 - 1333963 | 43069.7 |
| lps export abc transporter permease lptg | DI528_05945 | Not Available | + | 1333960 - 1335042 | 39627.6 |
| lps-assembly protein lptd | DI528_05950 | Not Available | + | 1335042 - 1337384 | 85899.5 |
| molecular chaperone sura | DI528_05955 | Not Available | + | 1337569 - 1338510 | 34323.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DI528_05960 | Not Available | + | 1338525 - 1339550 | 36162.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DI528_05965 | Not Available | + | 1339550 - 1340377 | 30071.7 |
| guanylate kinase | DI528_05970 | Not Available | - | 1340476 - 1341141 | 25359.1 |
| yicc family protein | DI528_05975 | Not Available | - | 1341145 - 1342035 | 32709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.