Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | DI528_05780 | Not Available | - | 1302166 - 1303296 | 41432.3 |
| duf1284 domain-containing protein | DI528_05785 | Not Available | - | 1303464 - 1303886 | 15254.5 |
| biotin transporter bioy | DI528_05790 | Not Available | - | 1303889 - 1304467 | 19430.5 |
| gntr family transcriptional regulator | DI528_05795 | Not Available | - | 1304688 - 1305356 | 24686.5 |
| antibiotic biosynthesis monooxygenase | DI528_05800 | Not Available | - | 1305472 - 1305855 | 14414.2 |
| nipsnap family protein | DI528_05805 | Not Available | - | 1305852 - 1306181 | 12513.8 |
| transcriptional regulator | DI528_05810 | Not Available | + | 1306254 - 1306940 | 24630.7 |
| qace family quaternary ammonium compound efflux smr transporter | DI528_05815 | Not Available | + | 1307035 - 1307382 | 11900.0 |
| tetr family transcriptional regulator | DI528_05820 | Not Available | + | 1307379 - 1307957 | 21203.4 |
| had family hydrolase | DI528_05825 | Not Available | + | 1308042 - 1308731 | 24710.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.