Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repb | DI528_05625 | Not Available | - | 1270223 - 1271392 | 42428.5 |
| plasmid partitioning protein repa | DI528_05630 | Not Available | - | 1271395 - 1272645 | 45696.3 |
| wgr domain-containing protein | DI528_05635 | Not Available | + | 1273136 - 1273387 | 9646.55 |
| hypothetical protein | DI528_05640 | Not Available | - | 1273713 - 1274150 | 16072.4 |
| universal stress protein | DI528_05650 | Not Available | - | 1275864 - 1276733 | 30801.9 |
| sodium:calcium antiporter | DI528_05655 | Not Available | - | 1276794 - 1277774 | 34305.0 |
| carbonate dehydratase | DI528_05660 | Not Available | - | 1277794 - 1280496 | 96303.1 |
| plasmid stabilization protein | DI528_05665 | Not Available | + | 1281630 - 1281878 | 9226.88 |
| vapc toxin family pin domain ribonuclease | DI528_05670 | Not Available | + | 1281875 - 1282288 | 15317.4 |
| Trna-gln | Not Available | Not Available | + | 1282542 - 1282616 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.