Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DI528_05470 | Not Available | - | 1233881 - 1235140 | 45248.7 |
| cytosine deaminase | DI528_05475 | Not Available | - | 1235391 - 1236677 | 46515.6 |
| abc transporter permease | DI528_05480 | Not Available | - | 1236765 - 1237709 | 33344.7 |
| abc transporter permease | DI528_05485 | Not Available | - | 1237706 - 1238755 | 36588.1 |
| sugar abc transporter atp-binding protein | DI528_05490 | Not Available | - | 1238745 - 1240289 | 54977.8 |
| amidase | DI528_05495 | Not Available | - | 1240286 - 1241764 | 50534.5 |
| bmp family abc transporter substrate-binding protein | DI528_05500 | Not Available | - | 1241776 - 1242762 | 34412.0 |
| hypothetical protein | DI528_05505 | Not Available | + | 1243069 - 1248618 | 180497.0 |
| hypothetical protein | DI528_05510 | Not Available | + | 1248643 - 1249872 | 39278.6 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | DI528_05515 | Not Available | + | 1249776 - 1251656 | 66598.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.