Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent hydrolase | DI528_05420 | Not Available | + | 1223512 - 1224771 | 44882.4 |
| phosphoglycerate dehydrogenase | DI528_05425 | Not Available | + | 1225064 - 1226488 | 49126.6 |
| hypothetical protein | DI528_05430 | Not Available | + | 1226587 - 1226916 | 12113.3 |
| hypothetical protein | DI528_05435 | Not Available | - | 1227041 - 1227490 | 16518.9 |
| cytosine deaminase | DI528_05440 | Not Available | - | 1227621 - 1228970 | 48022.2 |
| murr/rpir family transcriptional regulator | DI528_05445 | Not Available | - | 1229358 - 1230245 | 31791.3 |
| sugar abc transporter atp-binding protein | DI528_05450 | Not Available | - | 1230295 - 1231362 | 39020.1 |
| glycerophosphodiester phosphodiesterase | DI528_05455 | Not Available | - | 1231359 - 1232108 | 26834.9 |
| carbohydrate abc transporter permease | DI528_05460 | Not Available | - | 1232127 - 1232936 | 29565.9 |
| sugar abc transporter permease | DI528_05465 | Not Available | - | 1232926 - 1233795 | 31948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.