Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | DI528_05370 | Not Available | + | 1214643 - 1214774 | 4957.06 |
| transcriptional regulator | DI528_05375 | Not Available | + | 1215214 - 1216239 | 37213.6 |
| sugar abc transporter substrate-binding protein | DI528_05380 | Not Available | + | 1216277 - 1217230 | 32748.9 |
| abc transporter atp-binding protein | DI528_05385 | Not Available | + | 1217227 - 1218039 | 29128.4 |
| abc transporter permease | DI528_05390 | Not Available | + | 1218036 - 1219037 | 34415.1 |
| phosphotriesterase-related protein | DI528_05395 | Not Available | + | 1219045 - 1220112 | 39229.2 |
| cytoplasmic protein | DI528_05400 | Not Available | + | 1220145 - 1220915 | 28375.1 |
| ribokinase | DI528_05405 | Not Available | - | 1221064 - 1221963 | 30559.3 |
| btpa family membrane complex biogenesis protein | DI528_05410 | Not Available | + | 1222006 - 1222848 | 29863.8 |
| tena family transcriptional regulator | DI528_05415 | Not Available | + | 1222850 - 1223494 | 24079.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.