Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter | DI528_05220 | Not Available | + | 1184874 - 1186169 | 46736.5 |
| sugar abc transporter permease | DI528_05225 | Not Available | + | 1186413 - 1187312 | 33306.6 |
| carbohydrate abc transporter permease | DI528_05230 | Not Available | + | 1187317 - 1188138 | 30232.9 |
| abc transporter atp-binding protein | DI528_05235 | Not Available | + | 1188149 - 1189297 | 41288.9 |
| cysteine hydrolase | DI528_05240 | Not Available | + | 1189294 - 1189992 | 25126.9 |
| isochorismatase | DI528_05245 | Not Available | + | 1189985 - 1190626 | 22582.8 |
| allophanate hydrolase | DI528_05250 | Not Available | + | 1190631 - 1192457 | 64424.6 |
| cytosine deaminase | DI528_05255 | Not Available | + | 1192636 - 1193829 | 41859.0 |
| gamma-glutamyltransferase | DI528_05260 | Not Available | + | 1193886 - 1195418 | 53990.1 |
| amidohydrolase | DI528_05265 | Not Available | + | 1195448 - 1196677 | 43858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.