Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter atp-binding protein | DI528_05020 | Not Available | + | 1138706 - 1140223 | 53950.5 |
| abc transporter permease | DI528_05025 | Not Available | + | 1140220 - 1141182 | 33731.8 |
| sugar kinase | DI528_05030 | Not Available | + | 1141221 - 1142165 | 33365.9 |
| d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunit | DI528_05035 | Not Available | + | 1142167 - 1143447 | 46289.3 |
| laci family transcriptional regulator | DI528_05040 | Not Available | + | 1143661 - 1144674 | 37098.3 |
| hypothetical protein | DI528_05045 | Not Available | - | 1144696 - 1145352 | 24188.8 |
| arac family transcriptional regulator | DI528_05050 | Not Available | + | 1145600 - 1146625 | 38010.1 |
| alcohol dehydrogenase | DI528_05055 | Not Available | + | 1146875 - 1147912 | 36468.2 |
| (s)-ureidoglycine aminohydrolase | DI528_05060 | Not Available | + | 1149318 - 1150139 | 30615.6 |
| deor/glpr transcriptional regulator | DI528_05065 | Not Available | - | 1150216 - 1150986 | 27396.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.