Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase iron-sulfur subunit | DI528_04870 | Not Available | + | 1108977 - 1110275 | 46537.6 |
| hypothetical protein | DI528_04875 | Not Available | + | 1110395 - 1110856 | 16930.4 |
| lipid a oxidase | DI528_04880 | Not Available | - | 1110986 - 1111648 | 23747.6 |
| l,d-transpeptidase | DI528_04885 | Not Available | - | 1111889 - 1112575 | 25006.2 |
| hypothetical protein | DI528_04890 | Not Available | - | 1112708 - 1113496 | 28937.2 |
| dna-3-methyladenine glycosylase i | DI528_04895 | Not Available | + | 1113703 - 1114335 | 24051.7 |
| 3-methyladenine dna glycosylase | DI528_04900 | Not Available | - | 1114555 - 1115223 | 24775.3 |
| had family hydrolase | DI528_04905 | Not Available | - | 1115240 - 1115944 | 26162.2 |
| putative sulfate exporter family transporter | DI528_04910 | Not Available | - | 1116084 - 1117091 | 33869.1 |
| lysr family transcriptional regulator | DI528_04915 | Not Available | + | 1117196 - 1118086 | 31534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.