Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DI528_04820 | Not Available | - | 1097879 - 1099210 | 50348.2 |
| duf3422 domain-containing protein | DI528_04825 | Not Available | - | 1099359 - 1100630 | 46570.9 |
| gntr family transcriptional regulator | DI528_04830 | Not Available | + | 1100842 - 1101696 | 31625.3 |
| fe-s oxidoreductase | DI528_04835 | Not Available | + | 1101696 - 1102472 | 27761.6 |
| iron-sulfur cluster-binding protein | DI528_04840 | Not Available | + | 1102487 - 1103917 | 52655.3 |
| lactate utilization protein | DI528_04845 | Not Available | + | 1103920 - 1104597 | 24070.8 |
| lysr family transcriptional regulator | DI528_04850 | Not Available | - | 1104609 - 1105505 | 32852.8 |
| fad-binding oxidoreductase | DI528_04855 | Not Available | + | 1105637 - 1107070 | 50336.7 |
| glycolate oxidase subunit glce | DI528_04860 | Not Available | + | 1107327 - 1108535 | 42470.5 |
| hypothetical protein | DI528_04865 | Not Available | + | 1108532 - 1108912 | 13720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.