Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | DI528_04720 | Not Available | + | 1075034 - 1075417 | 13619.2 |
| mfs transporter | DI528_04725 | Not Available | - | 1075431 - 1076840 | 49144.3 |
| mbl fold metallo-hydrolase | DI528_04730 | Not Available | + | 1077035 - 1078018 | 34959.7 |
| duf1476 domain-containing protein | DI528_04735 | Not Available | - | 1078084 - 1078395 | 11965.2 |
| imp dehydrogenase | DI528_04740 | Not Available | + | 1078695 - 1080185 | 51880.6 |
| hypothetical protein | DI528_04745 | Not Available | + | 1080275 - 1080691 | 16016.0 |
| carboxymethylenebutenolidase | DI528_04750 | Not Available | + | 1080815 - 1081690 | 31200.3 |
| alcohol dehydrogenase adhp | DI528_04755 | Not Available | + | 1081889 - 1082914 | 36190.8 |
| lysr family transcriptional regulator | DI528_04760 | Not Available | - | 1082946 - 1083851 | 33338.8 |
| catalase/peroxidase hpi | DI528_04765 | Not Available | + | 1083956 - 1086127 | 79319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.