Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylputrescine oxidoreductase | DI528_04570 | Not Available | - | 1037483 - 1038790 | 46989.2 |
| glutamine synthetase | DI528_04575 | Not Available | - | 1038794 - 1040152 | 49419.6 |
| amino acid dehydrogenase | DI528_04580 | Not Available | - | 1040468 - 1041721 | 46398.4 |
| iron abc transporter substrate-binding protein | DI528_04585 | Not Available | - | 1041911 - 1042843 | 32412.7 |
| enterochelin esterase | DI528_04590 | Not Available | - | 1042874 - 1044460 | 56986.7 |
| tonb-dependent siderophore receptor | DI528_04595 | Not Available | - | 1044492 - 1046684 | 80266.6 |
| arac family transcriptional regulator | DI528_04600 | Not Available | + | 1046871 - 1047761 | 33563.3 |
| iron abc transporter permease | DI528_04605 | Not Available | + | 1047887 - 1048849 | 33330.3 |
| enterobactin abc transporter permease | DI528_04610 | Not Available | + | 1048839 - 1049807 | 34758.2 |
| iron abc transporter atp-binding protein | DI528_04615 | Not Available | + | 1049804 - 1050562 | 28149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.