Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp.
Accession NumberQFOR00000000.1
Gene Summary
Adenine Count
1140112 bp
Thymine Count
1149319 bp
Guanine Count
1757384 bp
Cytosine Count
1751118 bp
Genome Length
5797933 bp
Protein-coding Genes
5215 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putrescine/spermidine abc transporter permease | DI528_04420 | Not Available | + | 998514 - 999425 | 33583.1 |
| putrescine abc transporter permease poti | DI528_04425 | Not Available | + | 999435 - 1000250 | 29546.0 |
| asma family protein | DI528_04430 | Not Available | - | 1000281 - 1002191 | 67921.3 |
| acetoacetate--coa ligase | DI528_04435 | Not Available | + | 1002363 - 1004315 | 71314.8 |
| iron abc transporter permease | DI528_04440 | Not Available | - | 1004570 - 1006156 | 56855.7 |
| arac family transcriptional regulator | DI528_04445 | Not Available | + | 1006486 - 1007457 | 35946.4 |
| hypothetical protein | DI528_04450 | Not Available | + | 1007670 - 1008176 | 17755.8 |
| hypothetical protein | DI528_04455 | Not Available | + | 1008357 - 1008788 | 14475.4 |
| pas domain-containing sensor histidine kinase | DI528_04460 | Not Available | - | 1009021 - 1012767 | 133466.0 |
| phasin | DI528_04465 | Not Available | + | 1013025 - 1013474 | 15842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.