Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | COO09_00395 | Not Available | - | 85001 - 85732 | 27087.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | COO09_00400 | Not Available | + | 85891 - 86703 | 29644.1 |
| 30s ribosomal protein s20 | COO09_00405 | Not Available | + | 86812 - 87075 | 9473.65 |
| chromosomal replication initiator protein dnaa | COO09_00410 | Not Available | + | 87482 - 88921 | 52815.7 |
| iron-sulfur cluster assembly scaffold protein | COO09_00415 | Not Available | + | 88995 - 89441 | 15499.5 |
| sodium:proton exchanger | COO09_00420 | Not Available | + | 89438 - 91240 | 64153.4 |
| duf423 domain-containing protein | COO09_00425 | Not Available | + | 91215 - 91568 | 11775.8 |
| duf1449 domain-containing protein | COO09_00435 | Not Available | - | 93296 - 93913 | 21572.5 |
| 3-dehydroquinate synthase | COO09_00440 | Not Available | - | 94000 - 95100 | 38656.3 |
| shikimate kinase | COO09_00445 | Not Available | - | 95097 - 95660 | 20602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.