Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | COO09_04920 | Not Available | - | 1004292 - 1004996 | 25423.0 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | COO09_04925 | Not Available | + | 1005115 - 1005801 | 25661.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | COO09_04930 | Not Available | + | 1005941 - 1006429 | 16584.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | COO09_04935 | Not Available | + | 1006437 - 1007495 | 37346.6 |
| hypothetical protein | COO09_04940 | Not Available | - | 1007660 - 1008142 | 18227.6 |
| hypothetical protein | COO09_04945 | Not Available | - | 1008259 - 1008555 | 10656.0 |
| peptidase m16 | COO09_04950 | Not Available | - | 1008552 - 1011506 | 106166.0 |
| atp-dependent chaperone clpb | COO09_04955 | Not Available | + | 1011699 - 1014278 | 93698.3 |
| aspartyl beta-hydroxylase | COO09_04960 | Not Available | - | 1014385 - 1015002 | 23138.4 |
| sulfotransferase | COO09_04965 | Not Available | - | 1015002 - 1015625 | 23684.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.