Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | COO09_04820 | Not Available | + | 978955 - 979398 | 15941.2 |
| aminoglycoside phosphotransferase | COO09_04825 | Not Available | + | 979395 - 980354 | 35613.5 |
| nucleotidyltransferase family protein | COO09_04830 | Not Available | + | 980351 - 981109 | 27106.2 |
| double-strand break repair protein addb | COO09_04835 | Not Available | + | 981249 - 984332 | 110386.0 |
| double-strand break repair helicase adda | COO09_04840 | Not Available | + | 984329 - 987769 | 124096.0 |
| thioredoxin trxa | COO09_04845 | Not Available | + | 987857 - 988177 | 11358.6 |
| inositol monophosphatase | COO09_04850 | Not Available | - | 988217 - 989011 | 28891.5 |
| glutathione s-transferase | COO09_04855 | Not Available | - | 989011 - 989622 | 22777.2 |
| bifunctional ornithine acetyltransferase/n-acetylglutamate synthase | COO09_04860 | Not Available | - | 989752 - 990975 | 41814.6 |
| preprotein translocase subunit seca | COO09_04865 | Not Available | + | 991293 - 994028 | 101943.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.