Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | COO09_04770 | Not Available | - | 965315 - 965797 | 16690.0 |
| glycosyltransferase family 2 protein | COO09_04775 | Not Available | - | 965904 - 966905 | 35770.1 |
| hypothetical protein | COO09_04780 | Not Available | + | 966930 - 967490 | 19783.6 |
| hypothetical protein | COO09_04785 | Not Available | + | 967672 - 968160 | 17320.5 |
| adenosylhomocysteinase | COO09_04790 | Not Available | + | 968314 - 969723 | 50605.5 |
| tetr/acrr family transcriptional regulator | COO09_04795 | Not Available | - | 969837 - 970496 | 24170.1 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_04800 | Not Available | + | 970537 - 971679 | 39742.2 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | COO09_04805 | Not Available | + | 971686 - 974829 | 111668.0 |
| transporter | COO09_04810 | Not Available | + | 974826 - 976247 | 50128.5 |
| sensor histidine kinase | COO09_04815 | Not Available | + | 976501 - 978882 | 86002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.