Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | COO09_04670 | Not Available | + | 947706 - 948323 | 22781.2 |
| lps export abc transporter periplasmic protein lptc | COO09_04675 | Not Available | + | 948393 - 949061 | 24234.2 |
| osta family protein | COO09_04680 | Not Available | + | 949088 - 949585 | 17171.5 |
| lps export abc transporter atp-binding protein | COO09_04685 | Not Available | + | 949812 - 950588 | 27867.8 |
| rna polymerase sigma-54 factor | COO09_04690 | Not Available | + | 950774 - 952309 | 55257.0 |
| signal recognition particle protein | COO09_04695 | Not Available | + | 952727 - 954169 | 50702.6 |
| 30s ribosomal protein s16 | COO09_04700 | Not Available | + | 954206 - 954700 | 17379.1 |
| 16s rrna processing protein rimm | COO09_04705 | Not Available | + | 954709 - 955182 | 16882.4 |
| hypothetical protein | COO09_04710 | Not Available | + | 955179 - 955457 | 9512.33 |
| abrb/maze/spovt family dna-binding domain-containing protein | COO09_04715 | Not Available | + | 955505 - 955780 | 10392.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.