Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | COO09_04515 | Not Available | - | 921219 - 921965 | 27065.6 |
| peptidase m48, ste24p | COO09_04520 | Not Available | - | 921991 - 923055 | 37891.6 |
| duf898 domain-containing protein | COO09_04525 | Not Available | - | 923039 - 924070 | 38779.1 |
| threonine--trna ligase | COO09_04530 | Not Available | + | 924223 - 926226 | 74906.9 |
| antibiotic biosynthesis monooxygenase | COO09_04535 | Not Available | + | 926319 - 926615 | 10354.4 |
| pyrimidine 5'-nucleotidase | COO09_04540 | Not Available | + | 926778 - 927443 | 24515.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | COO09_04545 | Not Available | + | 927445 - 928284 | 29413.3 |
| hypothetical protein | COO09_04550 | Not Available | - | 928324 - 928542 | 8100.61 |
| cold-shock protein | COO09_04555 | Not Available | + | 928912 - 929118 | 7427.63 |
| translation initiation factor if-1 | COO09_04560 | Not Available | + | 929120 - 929371 | 9677.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.