Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | COO09_04465 | Not Available | - | 913910 - 914437 | 18923.9 |
| marr family transcriptional regulator | COO09_04470 | Not Available | - | 914446 - 914892 | 16271.6 |
| organic hydroperoxide resistance protein | COO09_04475 | Not Available | + | 915019 - 915444 | 14384.0 |
| hypothetical protein | COO09_04480 | Not Available | - | 915500 - 915901 | 13975.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | COO09_04485 | Not Available | + | 916022 - 917230 | 44882.5 |
| class i sam-dependent methyltransferase | COO09_04490 | Not Available | + | 917340 - 918566 | 46017.5 |
| hypothetical protein | COO09_04495 | Not Available | - | 918574 - 918963 | 13924.1 |
| hydroxyacylglutathione hydrolase | COO09_04500 | Not Available | - | 919054 - 919785 | 25947.7 |
| lactoylglutathione lyase | COO09_04505 | Not Available | - | 919785 - 920198 | 15617.6 |
| hypothetical protein | COO09_04510 | Not Available | - | 920455 - 921219 | 25747.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.