Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | COO09_04210 | Not Available | - | 866419 - 867690 | 44330.4 |
| hypothetical protein | COO09_04215 | Not Available | - | 867865 - 868110 | 8722.58 |
| argininosuccinate lyase | COO09_04220 | Not Available | - | 868107 - 869483 | 49312.9 |
| tlpa family protein disulfide reductase | COO09_04225 | Not Available | + | 869530 - 870042 | 18365.2 |
| voc family protein | COO09_04230 | Not Available | - | 870103 - 870486 | 13658.2 |
| dioxygenase | COO09_04235 | Not Available | + | 870561 - 871379 | 29604.3 |
| ai-2e family transporter | COO09_04240 | Not Available | + | 871467 - 872540 | 38202.9 |
| deda family protein | COO09_04245 | Not Available | - | 872657 - 873262 | 22500.8 |
| osmotic-shock protein | COO09_04250 | Not Available | + | 873432 - 873734 | 11382.7 |
| hypothetical protein | COO09_04255 | Not Available | + | 873731 - 874048 | 10826.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.