Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_04160 | Not Available | - | 856624 - 857217 | 21184.1 |
| leucine--trna ligase | COO09_04165 | Not Available | - | 857214 - 859724 | 93049.4 |
| duf3576 domain-containing protein | COO09_04170 | Not Available | - | 859746 - 860192 | 15694.0 |
| hypothetical protein | COO09_04175 | Not Available | + | 860446 - 861150 | 24389.9 |
| thiamine phosphate synthase | COO09_04180 | Not Available | - | 861347 - 861883 | 19353.8 |
| yggs family pyridoxal phosphate-dependent enzyme | COO09_04185 | Not Available | + | 861906 - 862652 | 25742.2 |
| zinc transporter zntb | COO09_04190 | Not Available | - | 862731 - 863660 | 34890.7 |
| siroheme synthase | COO09_04195 | Not Available | - | 863657 - 864427 | 26890.3 |
| aldo/keto reductase | COO09_04200 | Not Available | + | 864508 - 865512 | 36243.4 |
| utp--glucose-1-phosphate uridylyltransferase | COO09_04205 | Not Available | - | 865531 - 866400 | 31665.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.