Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kinase/pyrophosphorylase | COO09_04060 | Not Available | - | 838732 - 839562 | 30625.8 |
| uroporphyrinogen decarboxylase | COO09_04065 | Not Available | + | 839885 - 840919 | 37278.6 |
| copd family protein | COO09_04070 | Not Available | + | 840931 - 841377 | 16893.0 |
| transcription termination factor rho | COO09_04075 | Not Available | + | 841532 - 842788 | 46655.4 |
| class i sam-dependent methyltransferase | COO09_04080 | Not Available | + | 842810 - 843514 | 26768.4 |
| transcriptional regulator | COO09_04085 | Not Available | + | 843623 - 843973 | 12310.2 |
| aquaporin family protein | COO09_04090 | Not Available | + | 843970 - 844626 | 22103.2 |
| arsenate reductase (glutaredoxin) | COO09_04095 | Not Available | + | 844623 - 845039 | 14947.2 |
| hypothetical protein | COO09_04100 | Not Available | + | 845121 - 845771 | 23087.1 |
| pep-cterm sorting domain-containing protein | COO09_04105 | Not Available | + | 846128 - 847198 | 36547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.