Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_03960 | Not Available | + | 826182 - 826799 | 22837.2 |
| rida family protein | COO09_03965 | Not Available | + | 826831 - 827298 | 15832.3 |
| glycerophosphodiester phosphodiesterase | COO09_03970 | Not Available | + | 827276 - 828037 | 28138.8 |
| n-acetyltransferase | COO09_03975 | Not Available | + | 828031 - 829155 | 41433.9 |
| sel1 repeat family protein | COO09_03980 | Not Available | - | 829390 - 829686 | 10605.7 |
| m48 family peptidase | COO09_03985 | Not Available | - | 829832 - 830575 | 27576.6 |
| ycgn family cysteine cluster protein | COO09_03990 | Not Available | - | 830612 - 831052 | 16877.9 |
| sco family protein | COO09_03995 | Not Available | - | 831203 - 831859 | 23374.2 |
| ankyrin repeat domain-containing protein | COO09_04000 | Not Available | + | 831941 - 832561 | 21850.4 |
| hypothetical protein | COO09_04005 | Not Available | + | 832599 - 832712 | 4024.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.