Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | COO09_03860 | Not Available | - | 802643 - 805240 | 95983.8 |
| nad(p)-dependent oxidoreductase | COO09_03865 | Not Available | + | 805327 - 806100 | 27226.4 |
| low specificity l-threonine aldolase | COO09_03870 | Not Available | - | 806106 - 807107 | 34915.5 |
| hypothetical protein | COO09_03875 | Not Available | - | 807143 - 807976 | 29258.0 |
| hypothetical protein | COO09_03880 | Not Available | - | 808052 - 808351 | 10822.2 |
| polysaccharide deacetylase | COO09_03885 | Not Available | - | 808394 - 811738 | 121798.0 |
| hypothetical protein | COO09_03890 | Not Available | + | 811836 - 812084 | 8968.29 |
| duf4231 domain-containing protein | COO09_03895 | Not Available | - | 812234 - 813169 | 34894.9 |
| hypothetical protein | COO09_03900 | Not Available | - | 813189 - 816806 | 131982.0 |
| sodium-translocating pyrophosphatase | COO09_03905 | Not Available | - | 816958 - 819057 | 71547.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.