Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | COO09_03810 | Not Available | + | 793832 - 795157 | 47763.1 |
| chap domain-containing protein | COO09_03815 | Not Available | + | 795418 - 795999 | 20836.3 |
| type ii toxin-antitoxin system rele/pare family toxin | COO09_03820 | Not Available | - | 796003 - 796356 | 13589.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | COO09_03825 | Not Available | - | 796358 - 796621 | 9583.6 |
| had-ib family hydrolase | COO09_03830 | Not Available | - | 796674 - 797345 | 25092.7 |
| abc transporter permease | COO09_03835 | Not Available | + | 797476 - 798573 | 39421.1 |
| abc transporter atp-binding protein | COO09_03840 | Not Available | + | 798641 - 799474 | 29787.0 |
| mce family protein | COO09_03845 | Not Available | + | 799474 - 800421 | 32838.6 |
| abc transporter | COO09_03850 | Not Available | + | 800427 - 801026 | 20577.6 |
| hypothetical protein | COO09_03855 | Not Available | - | 801049 - 802482 | 53577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.