Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [protein-pii] uridylyltransferase | COO09_03760 | Not Available | - | 777805 - 780567 | 103156.0 |
| duf983 domain-containing protein | COO09_03765 | Not Available | - | 780712 - 781143 | 15726.5 |
| plp-dependent aminotransferase family protein | COO09_03770 | Not Available | + | 781224 - 782567 | 46646.6 |
| hypothetical protein | COO09_03775 | Not Available | - | 782577 - 783383 | 27357.9 |
| porin family protein | COO09_03780 | Not Available | + | 783598 - 784191 | 20107.7 |
| dna mismatch repair protein muts | COO09_03785 | Not Available | - | 784310 - 786907 | 91523.0 |
| nadp-dependent malic enzyme | COO09_03790 | Not Available | + | 787052 - 789328 | 81138.0 |
| mfs transporter | COO09_03795 | Not Available | + | 789518 - 790858 | 48020.4 |
| hypothetical protein | COO09_03800 | Not Available | + | 792026 - 792988 | 35436.9 |
| folate-binding protein | COO09_03805 | Not Available | - | 792992 - 793669 | 24457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.