Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase, class ii | COO09_03710 | Not Available | + | 769567 - 770958 | 48525.3 |
| hypothetical protein | COO09_03715 | Not Available | + | 771029 - 771262 | 7852.82 |
| duf1697 domain-containing protein | COO09_03720 | Not Available | - | 771259 - 771789 | 19323.3 |
| guanylate kinase | COO09_03725 | Not Available | + | 771834 - 772490 | 24673.4 |
| hypothetical protein | COO09_03730 | Not Available | - | 772607 - 773092 | 17506.5 |
| imidazoleglycerol-phosphate dehydratase | COO09_03735 | Not Available | + | 773211 - 773798 | 21611.7 |
| imidazole glycerol phosphate synthase subunit hish | COO09_03740 | Not Available | + | 773799 - 774413 | 21314.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | COO09_03745 | Not Available | + | 774517 - 775248 | 25238.2 |
| imidazole glycerol phosphate synthase subunit hisf | COO09_03750 | Not Available | + | 775245 - 776006 | 26013.1 |
| glutathione-disulfide reductase | COO09_03755 | Not Available | - | 776178 - 777524 | 49024.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.