Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 12-oxophytodienoate reductase | COO09_03610 | Not Available | + | 752534 - 753676 | 40828.7 |
| nuclear transport factor 2 family protein | COO09_03615 | Not Available | + | 753673 - 754236 | 21407.9 |
| nad(p)-dependent oxidoreductase | COO09_03620 | Not Available | + | 754233 - 755000 | 26057.8 |
| gfo/idh/moca family oxidoreductase | COO09_03625 | Not Available | - | 755033 - 756190 | 42040.0 |
| short-chain dehydrogenase | COO09_03630 | Not Available | + | 756350 - 757315 | 33444.5 |
| acyl-coa thioesterase ii | COO09_03635 | Not Available | + | 757321 - 758232 | 33470.8 |
| taud/tfda family dioxygenase | COO09_03640 | Not Available | + | 758229 - 759077 | 30749.4 |
| atpase | COO09_03645 | Not Available | - | 759344 - 760036 | 24855.4 |
| haloacid dehalogenase | COO09_03650 | Not Available | - | 760185 - 760859 | 24014.7 |
| pseudouridine synthase | COO09_03655 | Not Available | - | 760856 - 761983 | 41183.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.