Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | COO09_03355 | Not Available | - | 693337 - 694815 | 52629.6 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | COO09_03360 | Not Available | + | 695338 - 696237 | 32354.8 |
| tetr/acrr family transcriptional regulator | COO09_03365 | Not Available | - | 696250 - 696984 | 26803.4 |
| tetr family transcriptional regulator | COO09_03370 | Not Available | + | 697174 - 697845 | 24639.4 |
| iclr family transcriptional regulator | COO09_03375 | Not Available | + | 698198 - 698998 | 28959.6 |
| acyl-coa dehydrogenase | COO09_03380 | Not Available | + | 699142 - 700224 | 37904.0 |
| acyl-coa dehydrogenase | COO09_03385 | Not Available | + | 700230 - 701372 | 41279.5 |
| enoyl-coa hydratase | COO09_03390 | Not Available | + | 701382 - 702182 | 28291.2 |
| dehydratase | COO09_03395 | Not Available | + | 703056 - 703553 | 18500.8 |
| acyl-coa dehydrogenase | COO09_03400 | Not Available | + | 703550 - 704704 | 42512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.