Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | COO09_03305 | Not Available | - | 682349 - 682978 | 21542.9 |
| pyridoxal phosphate-dependent aminotransferase | COO09_03310 | Not Available | - | 682971 - 684206 | 43498.6 |
| amidohydrolase | COO09_03315 | Not Available | + | 684440 - 685582 | 43435.7 |
| amidohydrolase | COO09_03320 | Not Available | + | 685634 - 686605 | 35462.0 |
| hypothetical protein | COO09_03325 | Not Available | + | 686669 - 686857 | 6894.4 |
| hypothetical protein | COO09_03330 | Not Available | - | 687200 - 688477 | 44396.8 |
| gamma-glutamyltransferase | COO09_03335 | Not Available | - | 688529 - 690073 | 54095.7 |
| hypothetical protein | COO09_03340 | Not Available | - | 690149 - 690556 | 14883.8 |
| tetr family transcriptional regulator | COO09_03345 | Not Available | - | 691118 - 691771 | 24109.4 |
| acyl-coa dehydrogenase | COO09_03350 | Not Available | - | 692146 - 693285 | 42086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.