Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmd | COO09_03205 | Not Available | + | 664371 - 664502 | 4901.04 |
| cytochrome c maturation protein ccme | COO09_03210 | Not Available | + | 664502 - 664942 | 15740.1 |
| heme lyase ccmf/nrfe family subunit | COO09_03215 | Not Available | + | 664939 - 666864 | 68296.4 |
| dsbe family thiol:disulfide interchange protein | COO09_03220 | Not Available | + | 666864 - 667391 | 18533.9 |
| cytochrome c-type biogenesis protein ccmh | COO09_03225 | Not Available | + | 667607 - 668008 | 14779.2 |
| cytochrome c biogenesis protein | COO09_03230 | Not Available | + | 668008 - 668640 | 22349.0 |
| alanine dehydrogenase | COO09_03235 | Not Available | - | 668890 - 669987 | 37866.0 |
| lrp/asnc family transcriptional regulator | COO09_03240 | Not Available | + | 670123 - 670563 | 15968.3 |
| potassium transporter kup | COO09_03245 | Not Available | + | 670832 - 672778 | 69718.8 |
| hypothetical protein | COO09_03250 | Not Available | + | 673006 - 673227 | 8382.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.