Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | COO09_03155 | Not Available | - | 655119 - 656393 | 46195.8 |
| ku protein | COO09_03160 | Not Available | + | 656497 - 657381 | 32566.3 |
| atp-dependent dna ligase | COO09_03165 | Not Available | + | 657385 - 659925 | 93760.1 |
| antibiotic biosynthesis monooxygenase | COO09_03170 | Not Available | + | 659948 - 660286 | 13055.2 |
| hypothetical protein | COO09_03175 | Not Available | - | 660375 - 660608 | 7742.86 |
| rrf2 family transcriptional regulator | COO09_03180 | Not Available | - | 660825 - 661238 | 15168.5 |
| Trna-his | Not Available | Not Available | + | 661382 - 661458 | Not Available |
| glu/leu/phe/val dehydrogenase | COO09_03190 | Not Available | + | 661544 - 662593 | 35816.9 |
| eama/rhat family transporter | COO09_03195 | Not Available | - | 662604 - 663524 | 32351.7 |
| heme abc transporter permease | COO09_03200 | Not Available | + | 663644 - 664360 | 25893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.