Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | COO09_03105 | Not Available | + | 645896 - 646423 | 19468.3 |
| anti-sigma factor | COO09_03110 | Not Available | + | 646413 - 647174 | 27828.0 |
| peroxiredoxin | COO09_03115 | Not Available | + | 647174 - 648319 | 41742.5 |
| isoquinoline 1-oxidoreductase subunit | COO09_03120 | Not Available | - | 648369 - 648992 | 21807.3 |
| aldehyde oxidase | COO09_03125 | Not Available | - | 648989 - 651151 | 75711.0 |
| isoquinoline 1-oxidoreductase | COO09_03130 | Not Available | - | 651154 - 651612 | 16242.5 |
| dna ligase-associated dexh box helicase | COO09_03135 | Not Available | + | 651755 - 652747 | 36299.2 |
| atp-dependent dna ligase | COO09_03140 | Not Available | + | 652875 - 654473 | 58878.0 |
| hypothetical protein | COO09_03145 | Not Available | - | 654480 - 654785 | 10556.5 |
| hypothetical protein | COO09_03150 | Not Available | + | 654786 - 655007 | 8411.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.